miRBase entry: cbr-mir-7580-1

Stem-loop cbr-mir-7580-1

Accession

MI0024717

Description

Caenorhabditis briggsae cbr-mir-7580-1 precursor miRNA

Sequence

agccacuucgguugugguuauacaaacagaaguugauaUAACCCAAUCACGAAAAUGGCUGA
(((((.((((((((.(((((((..(((....)))..)))))))))))..))))..)))))..

Structure

--     -c    --    u       ca   a 
  agcca  uucg  guug gguuaua  aac g
  |||||  ||||  |||| |||||||  |||  
  UCGGU  AAGC  UAAC CCAAUau  uug a
AG     AA    AC    -       ag   a

Annotation confidence Not enough data

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Genome context

chrX: 11135472-11135533 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cbr-mir-7580-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-7580

Accession	MIMAT0029581
Description	Caenorhabditis briggsae cbr-miR-7580 mature miRNA
Sequence	39 - UAACCCAAUCACGAAAAUGGCUGA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508