miRBase entry: cbr-mir-7594b-2

Stem-loop cbr-mir-7594b-2

Accession

MI0024738

Description

Caenorhabditis briggsae cbr-mir-7594b-2 precursor miRNA

Sequence

ccgggacugaucguagccuucaacacucgaagcgaaguguUGAGGUAGACGUUUAGCCCGAAA
.((((.((((.(((.((((.(((((((((...)).)))))))))))..))).))))))))...

Structure

--c    a    u   -a    u       -  a 
   cggg cuga cgu  gccu caacacu cg  
   |||| |||| |||  |||| ||||||| || a
   GCCC GAUU GCA  UGGA GUuguga gc  
AAA    -    U   GA    -       a  g

Annotation confidence Not enough data

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Genome context

chrX: 11718111-11718173 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbr-mir-7594b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-7594b

Accession	MIMAT0029601
Description	Caenorhabditis briggsae cbr-miR-7594b mature miRNA
Sequence	41 - UGAGGUAGACGUUUAGCCCGAAA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508