Stem-loop hsv1-mir-H27

Accession

MI0024977

Description

Herpes Simplex Virus 1 hsv1-mir-H27 precursor miRNA

Gene family

MIPF0001760; mir-H20

Sequence

agaagagggaagaagaggggucgggauccaaaggacggacccagaccaccuuugguugCAGACCCCUUUCUCCCCCCUCUUcc
.((((((((..(((((((((((.(.(.(((((((..((.......)).))))))).).).))))))))).))..)))))))).

Structure

a        aa  -         g g u       ac  ac 
 gaagaggg  ga agagggguc g a ccaaagg  gg  c
 ||||||||  || ||||||||| | | |||||||  ||  c
 cUUCUCCC  CU UUUCCCCAG C u gguuucc  cc  a
c        CC  C         A g u       -a  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H27

• Accession: MIMAT0031152
• Description: Herpes Simplex Virus 1 hsv1-miR-H27 mature miRNA
• Sequence: 59 - CAGACCCCUUUCUCCCCCCUCUU - 81
• Evidence: experimental ; Northern [1], qRT-PCR [1]

References

1. PubMed ID: 23512275
   A microRNA encoded by HSV-1 inhibits a cellular transcriptional repressor of viral immediate early and early genes
   "Wu W, Guo Z, Zhang X, Guo L, Liu L, Liao Y, Wang J, Wang L, Li Q"
   "Sci China Life Sci (2013) 56:373-383