miRBase entry: cbr-mir-35f

Stem-loop cbr-mir-35f

Accession

MI0025048

Description

Caenorhabditis briggsae cbr-mir-35f precursor miRNA

Sequence

cgcugguuucugccgcagugauauuccaacguaguggcuaUCACCGGGUGAGAACUGGUAGA
.((((((((.((((.(.((((((..(((......))).)))))).))))).))))))))...

Structure

--c        c    g a      uu   ac 
   gcugguuu ugcc c gugaua  cca  g
   |||||||| |||| | ||||||  |||   
   UGGUCAAG GUGG G CACUau  ggu  u
AGA        A    - C      -c   ga

Annotation confidence Not enough data

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Genome context

chrX: 15371011-15371072 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35f

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-35f

Accession	MIMAT0029918
Description	Caenorhabditis briggsae cbr-miR-35f mature miRNA
Sequence	41 - UCACCGGGUGAGAACUGGUAGA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508