Stem-loop prd-mir-7875

Accession

MI0025569

Description

Panagrellus redivivus prd-mir-7875 precursor miRNA

Sequence

GUGGUCCGAAAUGGUUGACAAUGcauugccuuugcaUUGCCGAUCACUUGAGCACACCCcuuu
(((.((.....((((((.(((((((.......))))))).))))))...)).)))........

Structure

--------   G  CGAAA      A       uu 
        GUG UC     UGGUUG CAAUGca  g
        ||| ||     |||||| |||||||  c
        CAC AG     ACUAGC GUUacgu  c
uuucCCCA   G  --UUC      C       uu 

Annotation confidence Not enough data

Genome context

KB455338.1: 49437-49499 [+]

Mature prd-miR-7875-5p

• Accession: MIMAT0030496
• Description: Panagrellus redivivus prd-miR-7875-5p mature miRNA
• Sequence: 1 - GUGGUCCGAAAUGGUUGACAAUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7875-3p

• Accession: MIMAT0030497
• Description: Panagrellus redivivus prd-miR-7875-3p mature miRNA
• Sequence: 37 - UUGCCGAUCACUUGAGCACACCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295