Stem-loop prd-mir-7894

Accession

MI0025608

Description

Panagrellus redivivus prd-mir-7894 precursor miRNA

Sequence

GCUAGUAGGUUGGCGACAUGCUgugaugaugaauagucagCAUGCCGUUAAGCUAGUUGGUU
((((((((.((((((.(((((((..............))))))).)))))).))).))))).

Structure

-     -   G      A       ugauga 
 GCUAG UAG UUGGCG CAUGCUg      u
 ||||| ||| |||||| |||||||       
 UGGUU AUC AAUUGC GUACgac      g
U     G   G      C       ugauaa 

Annotation confidence Not enough data

Genome context

KB455003.1: 75036-75097 [+]

Mature prd-miR-7894-5p

• Accession: MIMAT0030574
• Description: Panagrellus redivivus prd-miR-7894-5p mature miRNA
• Sequence: 1 - GCUAGUAGGUUGGCGACAUGCU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7894-3p

• Accession: MIMAT0030575
• Description: Panagrellus redivivus prd-miR-7894-3p mature miRNA
• Sequence: 41 - CAUGCCGUUAAGCUAGUUGGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295