Stem-loop prd-mir-7918b

Accession

MI0025625

Description

Panagrellus redivivus prd-mir-7918b precursor miRNA

Gene family

MIPF0001655; mir-7918

Sequence

AUUUGGCUCUGAAAUCUUGCUGUguauauugaaauccAGCAAGUUUCAGAGCCUUCUG
....((((((((((.(((((((.((........)).))))))))))))))))).....

Structure

-AUUU          U       U  aua 
     GGCUCUGAAA CUUGCUG gu   u
     |||||||||| ||||||| ||    
     CCGAGACUUU GAACGAc ua   u
GUCUU          -       c  aag 

Annotation confidence Not enough data

Genome context

KB455549.1: 24096-24153 [-]

Mature prd-miR-7918b-5p

• Accession: MIMAT0030608
• Description: Panagrellus redivivus prd-miR-7918b-5p mature miRNA
• Sequence: 1 - AUUUGGCUCUGAAAUCUUGCUGU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7918b-3p

• Accession: MIMAT0030609
• Description: Panagrellus redivivus prd-miR-7918b-3p mature miRNA
• Sequence: 38 - AGCAAGUUUCAGAGCCUUCUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295