Stem-loop prd-mir-7911a

Accession

MI0025644

Description

Panagrellus redivivus prd-mir-7911a precursor miRNA

Gene family

MIPF0001858; mir-7911

Sequence

GCCCCCCGGAUGAUGCACCAUCGauugaagcugacgauaucGAUGGGCCUUGGCCAGGGGUUG
..((((.((..((.((.((((((((.............)))))))))).))..)).))))...

Structure

-GC    C  AU  U  A        ugaag 
   CCCC GG  GA GC CCAUCGau     c
   |||| ||  || || ||||||||     u
   GGGG CC  UU CG GGUAGcua     g
GUU    A  GG  C  -        uagca 

Annotation confidence Not enough data

Genome context

KB455487.1: 106405-106467 [+]

Mature prd-miR-7911a-5p

• Accession: MIMAT0030646
• Description: Panagrellus redivivus prd-miR-7911a-5p mature miRNA
• Sequence: 1 - GCCCCCCGGAUGAUGCACCAUCG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7911a-3p

• Accession: MIMAT0030647
• Description: Panagrellus redivivus prd-miR-7911a-3p mature miRNA
• Sequence: 42 - GAUGGGCCUUGGCCAGGGGUUG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295