miRBase entry: prd-mir-7937

Stem-loop prd-mir-7937

Accession

MI0025687

Description

Panagrellus redivivus prd-mir-7937 precursor miRNA

Sequence

CGUUUUAUAUUAUUAGUGUUGaauuuuuguuucauccAACACUUUUAGUCUGAAAUGAG
(((((((.((((..(((((((...............)))))))..)))).)))))))..

Structure

--       U    UU       aauuuu 
  CGUUUUA AUUA  AGUGUUG      u
  ||||||| ||||  |||||||      g
  GUAAAGU UGAU  UCACAAc      u
GA       C    UU       cuacuu

Annotation confidence Not enough data

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Genome context

KB455499.1: 53837-53895 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from prd-mir-7937

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature prd-miR-7937-5p

Accession	MIMAT0030732
Description	Panagrellus redivivus prd-miR-7937-5p mature miRNA
Sequence	1 - CGUUUUAUAUUAUUAGUGUUG - 21
Evidence	experimental Illumina [1]

Mature prd-miR-7937-3p

Accession	MIMAT0030733
Description	Panagrellus redivivus prd-miR-7937-3p mature miRNA
Sequence	38 - AACACUUUUAGUCUGAAAUGAG - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 23410827
The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
"Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
"Genetics (2013) 193:1279-1295