Stem-loop prd-mir-236

Accession

MI0025699

Description

Panagrellus redivivus prd-mir-236 precursor miRNA

Gene family

MIPF0000232; mir-236

Sequence

CGUUUUACCUGGUCAAUAUUAGagucgcuuugcgccaaauacuucUAAUACUGUCAGGUAAUGACGAU
((((((((((((.((.((((((((((((...)))......)).))))))).)))))))))).))))..

Structure

--    -        U  A       -  ------   u 
  CGUU UUACCUGG CA UAUUAGa gu      cgc  
  |||| |||||||| || ||||||| ||      ||| u
  GCAG AAUGGACU GU AUAAUcu ca      gcg  
UA    U        -  C       u  uaaacc   u 

Annotation confidence Not enough data

Genome context

KB455502.1: 271962-272029 [-]

Mature prd-miR-236-5p

• Accession: MIMAT0030756
• Description: Panagrellus redivivus prd-miR-236-5p mature miRNA
• Sequence: 1 - CGUUUUACCUGGUCAAUAUUAG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-236-3p

• Accession: MIMAT0030757
• Description: Panagrellus redivivus prd-miR-236-3p mature miRNA
• Sequence: 46 - UAAUACUGUCAGGUAAUGACGAU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295