Stem-loop prd-mir-7957d

Accession

MI0025722

Description

Panagrellus redivivus prd-mir-7957d precursor miRNA

Gene family

MIPF0001668; mir-7957

Sequence

AAUUUGUCCUUGGUUAAAUUGCUguugguuuuuaucugcAAAUUUGCUGAGGACAAAAUAC
..((((((((((((.(((((..(((.(((....))).))))))))))))))))))))....

Structure

--AA            U     GC   u   u 
    UUUGUCCUUGGU AAAUU  Ugu ggu u
    |||||||||||| |||||  ||| |||  
    AAACAGGAGUCG UUUAA  Acg cua u
CAUA            -     --   u   u 

Annotation confidence Not enough data

Genome context

KB455516.1: 72543-72603 [-]

Mature prd-miR-7957d-5p

• Accession: MIMAT0030800
• Description: Panagrellus redivivus prd-miR-7957d-5p mature miRNA
• Sequence: 1 - AAUUUGUCCUUGGUUAAAUUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7957d-3p

• Accession: MIMAT0030801
• Description: Panagrellus redivivus prd-miR-7957d-3p mature miRNA
• Sequence: 40 - AAAUUUGCUGAGGACAAAAUAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295