Stem-loop cpa-MIR166b

Accession

MI0026349

Description

Carica papaya cpa-MIR166b precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

3 open access papers mention cpa-MIR166b
(9 sentences)

Sequence

ggaaugucgucugguucgagaucauucaugugaagguucgagaucguuucuuggaugauuUCGGACCAGGCUUCAUUCCCC
((((((..((((((((((((((((((((.(.((.((((...)))).)).).))))))))))))))))))))..))))))..

Structure

--      uc                    u u  a    c 
  ggaaug  gucugguucgagaucauuca g ga gguu  
  ||||||  |||||||||||||||||||| | || |||| g
  CCUUAC  CGGACCAGGCUuuaguaggu c uu cuag  
CC      UU                    u u  g    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR166b

• Accession: MIMAT0031797
• Description: Carica papaya cpa-miR166b mature miRNA
• Sequence: 61 - UCGGACCAGGCUUCAUUCCCC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682