Stem-loop ppc-mir-8266

Accession

MI0026936

Description

Pristionchus pacificus ppc-mir-8266 precursor miRNA

Sequence

CUAUCAGUAGGGCGAAGUUCAUcuagauagguggUGAACGACGACGUACUGACAGC
((.((((((.(.((..(((((((.........)))))))..)).).)))))).)).

Structure

-  A      G G  AA       uag 
 CU UCAGUA G CG  GUUCAUc   a
 || |||||| | ||  |||||||   u
 GA AGUCAU C GC  CAAGUgg   a
C  C      G A  AG       ugg 

Annotation confidence Not enough data

Genome context

ABKE03000076.1: 916788-916843 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppc-mir-8266

Mature ppc-miR-8266-5p

• Accession: MIMAT0033016
• Description: Pristionchus pacificus ppc-miR-8266-5p mature miRNA
• Sequence: 1 - CUAUCAGUAGGGCGAAGUUCAU - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8266-3p

• Accession: MIMAT0033017
• Description: Pristionchus pacificus ppc-miR-8266-3p mature miRNA
• Sequence: 35 - UGAACGACGACGUACUGACAGC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260