Stem-loop pxy-mir-8541

Accession

MI0027392

Description

Plutella xylostella pxy-mir-8541 precursor miRNA

Sequence

60 reads, 2136 reads per million, 4 experiments

ucaucugguccggggacaguucucgccaaucagcugccacgauuacugcguucaggugcgcuuuuagagcgcccgcgUAAUUGAGGCUGGCUGAUUGGGggucc
......((.((.((((....)))).(((((((((((((.(((((((.(((....(((((.((...)).))))))))))))))).))).)))))))))).)).))

Structure

ucaucu  u  ggggacaguucucg          -   a       u   uuca     g  u 
      gg cc              ccaaucagcu gcc cgauuac gcg    ggugc cu  
      || ||              |||||||||| ||| ||||||| |||    ||||| || u
      cc gg              GGUUAGUCGG CGG GUUAAUg cgc    ccgcg ga  
------  u  -------------G          U   A       -   ----     a  u 

Annotation confidence Not enough data

Genome context

scaffold_15: 1961299-1961402 [-]

Mature pxy-miR-8541

• Accession: MIMAT0033800
• Description: Plutella xylostella pxy-miR-8541 mature miRNA
• Sequence: 78 - UAAUUGAGGCUGGCUGAUUGGG - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787