miRBase entry: atr-MIR8567

Stem-loop atr-MIR8567


Accession
MI0027445
Description
Amborella trichopoda atr-MIR8567 precursor miRNA


Sequence

2617 reads, 2056 reads per million, 4 experiments
gaaauuuaggauuuuaaaaauggugcagauugagcagaucuauaagcacuuaaaaaucuugaaaauagaugguccagauaacuuguuACAAGAUGCACUAAUUUUAGGACUugaaauuc
(((.((((((.((((((((.(((((((..((((((((...(((..(.(((.....((((.......))))))).)..)))..))))).)))..))))))).)))))))))))))).)))

Structure
   a      a        a       ga   -     auc   aa c   uaaaa    ug 
gaa uuuagg uuuuaaaa uggugca  uug agcag   uau  g acu     aucu  a
||| |||||| |||||||| |||||||  ||| |||||   |||  | |||     ||||  a
cuu aaguUC AGGAUUUU AUCACGU  AAC uuguu   aua  c ugg     uaga  a
   a      -        A       AG   A     -ca   ga c   -----    ua 


Annotation confidence Low
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Genome context
scaffold00024: 566615-566733 [+]

Database links

Mature atr-miR8567

Accession MIMAT0033843
Description Amborella trichopoda atr-miR8567 mature miRNA
Sequence 88 - ACAAGAUGCACUAAUUUUAGGACU - 111
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24357323
    The Amborella genome and the evolution of flowering plants
    "Amborella Genome Project"
    "Science (2013) 342:1241089