Accession
MI0027526
Description
Amborella trichopoda
atr-MIR319a precursor miRNA
Gene family
MIPF0000010;
MIR159
Sequence
26558
reads,
14150
reads per million, 4 experiments
gagggagcucucuuuaguccaccuaugguuggugucuaggggucgaauuaucugccgacucauucauucaaauaauugguagaaaggccgugauuuuucucucuacucuuuaaauuugugaaugaugcgggagauaaauuucacccuugccucaccauucUUGGACUGAAGGGAGCUCCCuc
(((((((((((((((((((((...(((((.(((....((((((.(((((((((.(((..((((((((.....(((..((((((.(((..........))).))))))..))).....))))))))..))).))))))..))))))))))))..)))))...)))))))))))))))))))))
(((((((((((((((((((((...(((((.(((....((((((.(((((((((.(((..((((((((.....(((..((((((.(((..........))).))))))..))).....))))))))..))).))))))..))))))))))))..)))))...)))))))))))))))))))))
Structure
ccu -u gucu c -- g ac ucaaa uu a ccgu
gagggagcucucuuuagucca auggu ggu aggggu gaa uuaucu ccg ucauucau uaa gguaga agg g
||||||||||||||||||||| ||||| ||| |||||| ||| |||||| ||| |||||||| ||| |||||| |||
cuCCCUCGAGGGAAGUCAGGU uacca ccg uuccca cuu aauaga ggc aguaagug auu ucaucu ucu a
Ucu cu ---- - ua g gu uuuaa uc c uuuu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00077: 2616711-2616892 [+]
Database links
Mature atr-miR319a
| Accession | MIMAT0033928 |
| Description | Amborella trichopoda atr-miR319a mature miRNA |
| Sequence | 161 - UUGGACUGAAGGGAGCUCCC - 180 |
| Evidence |
experimental
Illumina [1] |
References
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