Accession
MI0027543
Description
Amborella trichopoda
atr-MIR477 precursor miRNA
Gene family
MIPF0000216;
MIR477
Sequence
185
reads,
666
reads per million, 4 experiments
cuagaucuaugcagaugggaguagaggaccaagaaaaauuucagggcaccuaaucuucacucucccucaagggcuucugguccuuaccauucaugguaagaggaauAGAGGCCUUAGGGGAGAGUGGaugcuagguguuuugguuucuaucaaucgguuauacuuccuagccuuggccuuag
(((..(((((....)))))..)))(((.((((((((....((((((((((((...((((((((((((..((((((((((.(((((((((....))))..))))).)))))))))).))))))))))))...))))))))))))))))).......(((((.......))))).))))))...
(((..(((((....)))))..)))(((.((((((((....((((((((((((...((((((((((((..((((((((((.(((((((((....))))..))))).)))))))))).))))))))))))...))))))))))))))))).......(((((.......))))).))))))...
Structure
cuagaucuaugcagaugggaguag a ------------------------- aauu auc ca g -- u
agg cca agaaa ucagggcaccua uucacucucccu agggcuucug uccuu acca u
||| ||| ||||| |||||||||||| |||||||||||| |||||||||| ||||| ||||
ucc ggu ucuuu gguuuuguggau aGGUGAGAGGGG UUCCGGAGAu aggag uggu c
---------------------gau - uccgauccuucauauuggcuaacua ---- cgu -A a aa a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00003: 709668-709849 [+]
Database links
Mature atr-miR477
| Accession | MIMAT0033946 |
| Description | Amborella trichopoda atr-miR477 mature miRNA |
| Sequence | 107 - AGAGGCCUUAGGGGAGAGUGG - 127 |
| Evidence |
experimental
Illumina [1] |
References
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