Stem-loop cfa-mir-8859b

Accession

MI0027954

Description

Canis familiaris cfa-mir-8859b precursor miRNA

Sequence

cucacggcccugcaccgcggauccgaauccgggggucggguuccgcgccuggaguccgccucgugguucugaguccgGGUCGGAUUCCGUGCCUGGAGUccgccccgcgggccugcaucgugguuccaaguccgggucc
.....(((((.((...((((((.....((((((.(.((((.((((.(((((((.((.(((....)))...)).))))))))))).))))).))))))))))))...))))))).....(.(((........))).)...

Structure

---------------------cucac     u  acc      ccgaa      g u    u    c       g  --c   u 
                          ggccc gc   gcggau     uccggg g cggg uccg gccugga uc   gcc c
                          ||||| ||   ||||||     |||||| | |||| |||| ||||||| ||   |||  
                          ccggg cg   cgccUG     AGGUCC U GCCU AGGC UGGgccu ag   ugg g
ccugggccugaaccuuggugcuacgu     -  ccc      -----      G -    U    -       g  ucu   u 

Annotation confidence Not enough data

Genome context

chr18: 46690541-46690679 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-8859b

Mature cfa-miR-8859b

• Accession: MIMAT0034358
• Description: Canis familiaris cfa-miR-8859b mature miRNA
• Sequence: 78 - GGUCGGAUUCCGUGCCUGGAGU - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545