Stem-loop cfa-mir-8865

Accession

MI0027958

Description

Canis familiaris cfa-mir-8865 precursor miRNA

Sequence

gcccgccgggaggggaagggagggggugucgucggcgacgacggcgugucguggggggggagacgggccccgcgcccgCCUCCCUUUCUCGGACGUCGCCGucccggccccccccccaccgugucccuuccggggggggucc
.(((.((((((((((.(.((.(((((.(..(((((....(((((((((((..((((((((((.(((((.....))))).))))))))))..)))).))))))))))))..).))))).)).).)))))))))).))).....

Structure

----g   g          a g  a     u uc     cgac       -    gu          a     c 
     ccc ccgggagggg a gg ggggg g  gucgg    gacggcg uguc  ggggggggag cgggc c
     ||| |||||||||| | || ||||| |  |||||    ||||||| ||||  |||||||||| ||||| c
     ggg ggccuucccu u cc ccccc c  cggcc    cuGCCGC GCAG  UCUUUCCCUC gcccg g
ccugg   g          g g  a     c cc     ----       U    GC          C     c 

Annotation confidence Not enough data

Genome context

chr7: 80973870-80974011 [-]

Mature cfa-miR-8865

• Accession: MIMAT0034362
• Description: Canis familiaris cfa-miR-8865 mature miRNA
• Sequence: 79 - CCUCCCUUUCUCGGACGUCGCCG - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545