miRBase entry: cfa-mir-1185

Stem-loop cfa-mir-1185

Accession

MI0027980

Description

Canis familiaris cfa-mir-1185 precursor miRNA

Sequence

gguccucacuggagcugcucuuugguacuugaagagaggauacccuuuguauguucacuuuauuaauggcgaAUAUACAGGGGGAGACUCUUAUuugcguaucaaacucugaccgggaaggcgcucgga
(.(((.....))).).....((((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))))......(((((......))))).

Structure

---gguccucacuggagcugcuc        u    -     ga a              a  uua 
                       uuugguac ugaa gagag  u cccuuuguauguuc cu   u
                       |||||||| |||| |||||  | |||||||||||||| ||    
                       aaacuaug guuU UUCUC  A GGGGGACAUAUAag gg   u
aggcucgcggaagggccagucuc        c    A     AG -              c  uaa

Annotation confidence Not enough data

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Genome context

chr8: 69273204-69273332 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cfa-mir-1185

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-1185

Accession	MIMAT0034383
Description	Canis familiaris cfa-miR-1185 mature miRNA
Sequence	73 - AUAUACAGGGGGAGACUCUUAU - 94
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545