Stem-loop gsa-mir-277b

Accession

MI0028974

Description

Gyrodactylus salaris gsa-mir-277b precursor miRNA

Sequence

AUAGACUCUACAUGUAUUUCuauaacagggucauaagugccacaauaUAAAUGCAUGUUUUUGUCUAUAC
((((((...((((((((((.(((.....(((.......)))...))).))))))))))....))))))..

Structure

--      -UCU          C   aacag   ca 
  AUAGAC    ACAUGUAUUU uau     ggu  u
  ||||||    |||||||||| |||     |||  a
  UAUCUG    UGUACGUAAA aua     ccg  a
CA      UUUU          U   --aca   ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-277b-5p

• Accession: MIMAT0035310
• Description: Gyrodactylus salaris gsa-miR-277b-5p mature miRNA
• Sequence: 1 - AUAGACUCUACAUGUAUUUC - 20
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-277b-3p

• Accession: MIMAT0035311
• Description: Gyrodactylus salaris gsa-miR-277b-3p mature miRNA
• Sequence: 48 - UAAAUGCAUGUUUUUGUCUAUAC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628