Stem-loop gga-mir-363

Accession

MI0029344

Description

Gallus gallus gga-mir-363 precursor miRNA

Literature search

0 open access papers mention gga-mir-363
(0 sentences)

Sequence

39612 reads, 1065 reads per million, 5 experiments

guaagcuuuguuuugcuguugucggGUGGAUCACGAUGCAAUUUUGAuuaguuuaguaggagaaaAAUUGCACGGUAUCCAUCUGUAAaccgcaagaccuucauccg
.........(((((((.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).))))))).........

Structure

guaagcuuu       u   gu         CA  A         --GA   gu 
         guuuugc guu  cggGUGGAU  CG UGCAAUUUU    uua  u
         ||||||| |||  |||||||||  || |||||||||    |||   
         cagaacg caA  GUCUACCUA  GC ACGUUAAaa    gau  u
gccuacuuc       c   AU         UG  -         agag   ga 

Annotation confidence High

Genome context

chr4: 3994409-3994515 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-363

Mature gga-miR-363-5p

• Accession: MIMAT0037553
• Description: Gallus gallus gga-miR-363-5p mature miRNA
• Sequence: 26 - GUGGAUCACGAUGCAAUUUUGA - 47
• Evidence: experimental ; Illumina [2]

Mature gga-miR-363-3p

• Accession: MIMAT0037554
• Description: Gallus gallus gga-miR-363-3p mature miRNA
• Sequence: 66 - AAUUGCACGGUAUCCAUCUGUAA - 88
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196


2. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973