Stem-loop cpi-let-7a-2

Accession

MI0029372

Description

Chrysemys picta cpi-let-7a-2 precursor miRNA

Sequence

gcaugcauccagguUGAGGUAGUAGGUUGUAUAGUUuagaauuacaccaagggagauaaCUGUACAACCUCCUAGCUUUCCuugggucuugcacaa
(((.(.(((((((..(((.(((.(((((((((((((.....................))))))))))))).))).)))..)))))))).)))....

Structure

----   u c       uU   G   U             uagaauuac 
    gca g auccagg  GAG UAG AGGUUGUAUAGUU         a
    ||| | |||||||  ||| ||| |||||||||||||         c
    cgu c uggguuC  UUC AUC UCCAACAUGUCaa         c
aaca   u -       CU   G   C             uagagggaa 

Annotation confidence Not enough data

Genome context

KK088232.1: 2328699-2328794 [-]

Mature cpi-let-7a-5p

• Accession: MIMAT0037594
• Description: Chrysemys picta cpi-let-7a-5p mature miRNA
• Sequence: 15 - UGAGGUAGUAGGUUGUAUAGUU - 36
• Evidence: experimental ; Illumina [1]

Mature cpi-let-7a-2-3p

• Accession: MIMAT0037596
• Description: Chrysemys picta cpi-let-7a-2-3p mature miRNA
• Sequence: 60 - CUGUACAACCUCCUAGCUUUCC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196