Stem-loop cpi-mir-7a-3

Accession

MI0029389

Description

Chrysemys picta cpi-mir-7a-3 precursor miRNA

Sequence

auggucuggcucugugUGGAAGACUAGUGAUUUUGUUguucugacuuauaaaagugaCAACAAAUCAUAGCCUGCCAUAcagcacggaccacagcca
.(((((((...((((((((.((.(((.((((((.((((((...((((....))))))))))))))))))).)).))))))))..)))))))......

Structure

-----a       gcu        A  A   G      U      cug    a 
      uggucug   cugugUGG AG CUA UGAUUU GUUguu   acuu u
      |||||||   |||||||| || ||| |||||| ||||||   ||||  
      accaggc   gacAUACC UC GAU ACUAAA CAACag   ugaa a
accgac       -ac        G  C   -      -      ---    a 

Annotation confidence Not enough data

Genome context

KK082934.1: 5983561-5983657 [-]

Mature cpi-miR-7a-5p

• Accession: MIMAT0037617
• Description: Chrysemys picta cpi-miR-7a-5p mature miRNA
• Sequence: 17 - UGGAAGACUAGUGAUUUUGUU - 37
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-7a-3-3p

• Accession: MIMAT0037620
• Description: Chrysemys picta cpi-miR-7a-3-3p mature miRNA
• Sequence: 58 - CAACAAAUCAUAGCCUGCCAUA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196