Stem-loop cpi-mir-7b

Accession

MI0029390

Description

Chrysemys picta cpi-mir-7b precursor miRNA

Sequence

uucugggucggucUGGAAGACUUGUGAUUUUGUUGUuuccagugucagggaagcgaacaacaaaucccagucuccucacagccccaggacug
(((((((.(.((..(((.((((.(.(((((((((((((((........)))))).))))..)))))).)))))))..)).).)))))))...

Structure

---       u g  cU   A    U U     --    -      agu 
   uucuggg c gu  GGA GACU G GAUUU  UGUU GUuucc   g
   ||||||| | ||  ||| |||| | |||||  |||| ||||||    
   aggaccc g ca  ccu cuga c cuaaa  acaa cgaagg   u
guc       c a  cu   -    c -     ca    g      gac 

Annotation confidence Not enough data

Genome context

KK083007.1: 3181798-3181889 [+]

Mature cpi-miR-7b-5p

• Accession: MIMAT0037621
• Description: Chrysemys picta cpi-miR-7b-5p mature miRNA
• Sequence: 14 - UGGAAGACUUGUGAUUUUGUUGU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196