Stem-loop cpi-mir-10c

Accession

MI0029397

Description

Chrysemys picta cpi-mir-10c precursor miRNA

Sequence

auacagucgucuauauguACCCUGUAGAAUCGAAUUUGUGugaauauuugagagucaCAAAUUCGUCUCUAGGGGAGUauauggacgaugccagagc
.....(((((((((..(((((((.((((..((((((((((...............))))))))))..)))).))).)))))))))))))........

Structure

---auaca         au    -   G    AU          ugaaua 
        gucgucuau  guAC CCU UAGA  CGAAUUUGUG      u
        |||||||||  |||| ||| ||||  ||||||||||      u
        uagcaggua  uaUG GGG AUCU  GCUUAAACac      u
cgagaccg         --    A   G    CU          ugagag 

Annotation confidence Not enough data

Genome context

KK083067.1: 969489-969585 [-]

Mature cpi-miR-10c-5p

• Accession: MIMAT0037629
• Description: Chrysemys picta cpi-miR-10c-5p mature miRNA
• Sequence: 19 - ACCCUGUAGAAUCGAAUUUGUG - 40
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-10c-3p

• Accession: MIMAT0037630
• Description: Chrysemys picta cpi-miR-10c-3p mature miRNA
• Sequence: 58 - CAAAUUCGUCUCUAGGGGAGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196