Stem-loop cpi-mir-124-1

Accession

MI0029455

Description

Chrysemys picta cpi-mir-124-1 precursor miRNA

Sequence

ccucucucCGUGUUCACAGCGGACCUUGAuuuaaauguccauacaauUAAGGCACGCGGUGAAUGCCAagaacgaggcugaau
(((((((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))..))))......

Structure

------    --   cC        A   GA        uaaau 
      ccuc  ucu  GUGUUCAC GCG  CCUUGAuu     g
      ||||  |||  |||||||| |||  ||||||||     u
      ggag  aga  CGUAAGUG CGC  GGAAUuaa     c
uaaguc    ca   AC        G   AC        cauac 

Annotation confidence Not enough data

Genome context

AHGY02146791.1: 117-199 [-]

Mature cpi-miR-124-5p

• Accession: MIMAT0037726
• Description: Chrysemys picta cpi-miR-124-5p mature miRNA
• Sequence: 9 - CGUGUUCACAGCGGACCUUGA - 29
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-124-3p

• Accession: MIMAT0037727
• Description: Chrysemys picta cpi-miR-124-3p mature miRNA
• Sequence: 48 - UAAGGCACGCGGUGAAUGCCA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196