miRBase entry: cpi-mir-132

Stem-loop cpi-mir-132

Accession

MI0029471

Description

Chrysemys picta cpi-mir-132 precursor miRNA

Sequence

ugucuccagggcaACCGUGGCUUUAGAUUGUUACUgugguuguguguuggUAACAGUCUACAGCCAUGGUCGcuugggcuagacacac
(((((((.((((.(((((((((.(((((((((((((...........))))))))))))).))))))))).)))).))..)))))...

Structure

---     --  a    a         U             uggu 
   ugucu  cc gggc ACCGUGGCU UAGAUUGUUACUg    u
   |||||  || |||| ||||||||| |||||||||||||    g
   acaga  gg uucG UGGUACCGA AUCUGACAAUggu    u
cac     uc  g    C         C             ugug

Annotation confidence Not enough data

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Genome context

KK083788.1: 18748-18835 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpi-mir-132

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpi-miR-132-5p

Accession	MIMAT0037748
Description	Chrysemys picta cpi-miR-132-5p mature miRNA
Sequence	14 - ACCGUGGCUUUAGAUUGUUACU - 35
Evidence	experimental Illumina [1]

Mature cpi-miR-132-3p

Accession	MIMAT0037749
Description	Chrysemys picta cpi-miR-132-3p mature miRNA
Sequence	51 - UAACAGUCUACAGCCAUGGUCG - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196