Stem-loop cpi-mir-153-1

Accession

MI0029496

Description

Chrysemys picta cpi-mir-153-1 precursor miRNA

Sequence

cagcugccagugCCAUUUUUGUGAUUUGCAGCUaguaaucuggguccagUUGCAUAGUCACAAAAGUGAgcauuggcagccgugccu
..(((((((((((((((((((((((((((((((.(..........).))))))).))))))))))))).))))))))))).......

Structure

-----ca           -             -       a uaau 
       gcugccagugC CAUUUUUGUGAUU UGCAGCU g    c
       ||||||||||| ||||||||||||| ||||||| |     
       cgacgguuacg GUGAAAACACUGA ACGUUga c    u
uccgugc           A             U       c uggg 

Annotation confidence Not enough data

Genome context

KK082919.1: 338336-338422 [+]

Mature cpi-miR-153-5p

• Accession: MIMAT0037787
• Description: Chrysemys picta cpi-miR-153-5p mature miRNA
• Sequence: 13 - CCAUUUUUGUGAUUUGCAGCU - 33
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-153-3p

• Accession: MIMAT0037788
• Description: Chrysemys picta cpi-miR-153-3p mature miRNA
• Sequence: 50 - UUGCAUAGUCACAAAAGUGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196