Stem-loop cpi-mir-190a

Accession

MI0029510

Description

Chrysemys picta cpi-mir-190a precursor miRNA

Sequence

ugcagggcucugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaacuauauaucaaacauauuccuauaguguccugccc
.(((((((.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).)))))))..

Structure

-u       u     -U                UA     uuau 
  gcagggc cugug  GAUAUGUUUGAUAUAU  GGUug    u
  ||||||| |||||  ||||||||||||||||  |||||     
  cguccug gauau  uuauacaaacuauaua  ucaac    u
cc       u     cc                --     cuaa 

Annotation confidence Not enough data

Genome context

KK088223.1: 9157959-9158044 [+]

Mature cpi-miR-190a-5p

• Accession: MIMAT0037804
• Description: Chrysemys picta cpi-miR-190a-5p mature miRNA
• Sequence: 15 - UGAUAUGUUUGAUAUAUUAGGU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196