Stem-loop cpi-mir-190b

Accession

MI0029511

Description

Chrysemys picta cpi-mir-190b precursor miRNA

Sequence

ugccccugccgcuggcUGAUAUGUUUGAUAUUAGGUUGuuuuauuggaaaaccaacuaaauaucaaacauauucuuccggcgccagggccgcu
.(((((((.((((((..(((((((((((((((.(((((((((.....)))).))))).))))))))))))).))..)))))).)))))..)).

Structure

u  --     c      cU  -             A     -    a 
 gc  cccug cgcugg  GA UAUGUUUGAUAUU GGUUG uuuu u
 ||  ||||| ||||||  || ||||||||||||| ||||| |||| u
 cg  gggac gcggcc  cu auacaaacuauaa ucaac aaaa g
u  cc     c      uu  u             a     c    g 

Annotation confidence Not enough data

Genome context

KK083007.1: 244247-244339 [+]

Mature cpi-miR-190b-5p

• Accession: MIMAT0037805
• Description: Chrysemys picta cpi-miR-190b-5p mature miRNA
• Sequence: 17 - UGAUAUGUUUGAUAUUAGGUUG - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196