miRBase entry: cpi-mir-191

Stem-loop cpi-mir-191

Accession

MI0029512

Description

Chrysemys picta cpi-mir-191 precursor miRNA

Sequence

ugauggcacgacagcgggCAACGGAAUCCCAAAAGCAGCUgucuuccucugagcauuccagcugcgguuggauuucguuaccugcucuccugcccgg
....((((.((.((((((.((((((((((.((..(((((((.................)))))))..)))))))))))).)))))).)).))))...

Structure

ugau    c  c      C          C  AA       ucuuccu 
    ggca ga agcggg AACGGAAUCC AA  GCAGCUg       c
    |||| || |||||| |||||||||| ||  |||||||       u
    ccgu cu ucgucc uugcuuuagg uu  cgucgac       g
-ggc    c  c      a          -  gg       cuuacga

Annotation confidence Not enough data

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Genome context

KK083069.1: 935418-935514 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpi-mir-191

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpi-miR-191-5p

Accession	MIMAT0037806
Description	Chrysemys picta cpi-miR-191-5p mature miRNA
Sequence	19 - CAACGGAAUCCCAAAAGCAGCU - 40
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196