Stem-loop cpi-mir-193b

Accession

MI0029515

Description

Chrysemys picta cpi-mir-193b precursor miRNA

Sequence

uugugguuccagagucgggguuuugggggcgagaugagcuuauguuuuauccAACUGGCCCACAAAGUCCCGCUuuugguggucacu
..((((..((((((.((((((((((.((((.((.(((((....))).....)).)).)))).)))))))))).))))))...)))).

Structure

uu    -uu      u          g    g  a  -----   u 
  gugg   ccagag cgggguuuug gggc ag ug     agc u
  ||||   |||||| |||||||||| |||| || ||     |||  
  cacu   gguuuU GCCCUGAAAC CCCG UC Ac     uug a
-u    ggu      C          A    G  A  cuauu   u 

Annotation confidence Not enough data

Genome context

KK083043.1: 1913442-1913528 [-]

Mature cpi-miR-193b-3p

• Accession: MIMAT0037811
• Description: Chrysemys picta cpi-miR-193b-3p mature miRNA
• Sequence: 53 - AACUGGCCCACAAAGUCCCGCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196