Stem-loop cpi-mir-205a

Accession

MI0029531

Description

Chrysemys picta cpi-mir-205a precursor miRNA

Sequence

auccaugaauucuguugUCCUUCAUUCCACCGGAGUCUGucucauaacuaaucaGAUUUCAGUGGAGUGAAGCACAagagacauggag
.((((((...(((.((((.(((((((((((.((((((((.............)))))))).))))))))))).)))).))))))))).

Structure

a      aau   g    C           C        ucuca 
 uccaug   ucu uugU CUUCAUUCCAC GGAGUCUG     u
 ||||||   ||| |||| ||||||||||| ||||||||     a
 agguac   aga aACA GAAGUGAGGUG CUUUAGac     a
g      ---   g    C           A        uaauc 

Annotation confidence Not enough data

Genome context

KK082997.1: 2704853-2704940 [-]

Mature cpi-miR-205a-5p

• Accession: MIMAT0037830
• Description: Chrysemys picta cpi-miR-205a-5p mature miRNA
• Sequence: 18 - UCCUUCAUUCCACCGGAGUCUG - 39
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-205a-3p

• Accession: MIMAT0037831
• Description: Chrysemys picta cpi-miR-205a-3p mature miRNA
• Sequence: 55 - GAUUUCAGUGGAGUGAAGCACA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196