Stem-loop cpi-mir-210

Accession

MI0029535

Description

Chrysemys picta cpi-mir-210 precursor miRNA

Sequence

cagaagcuggugAGCCACUGACUAACGCACAUUGugcuguuaaagaauccaCUGUGCGUGUGACAGCGGCUAAccagcuuuucggcc
.((((((((((.((((.(((.(..(((((((.((..((.....))....)).)))))))..).))).)))).)))))))))).....

Structure

----c          g    A   A UA       U  --ug  g 
     agaagcuggu AGCC CUG C  ACGCACA UG    cu u
     |||||||||| |||| ||| |  ||||||| ||    || u
     uuuucgaccA UCGG GAC G  UGCGUGU ac    ga a
ccggc          A    C   A UG       C  cuaa  a 

Annotation confidence Not enough data

Genome context

KK083161.1: 870670-870756 [+]

Mature cpi-miR-210-5p

• Accession: MIMAT0037836
• Description: Chrysemys picta cpi-miR-210-5p mature miRNA
• Sequence: 13 - AGCCACUGACUAACGCACAUUG - 34
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-210-3p

• Accession: MIMAT0037837
• Description: Chrysemys picta cpi-miR-210-3p mature miRNA
• Sequence: 52 - CUGUGCGUGUGACAGCGGCUAA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196