Stem-loop cpi-mir-216b

Accession

MI0029540

Description

Chrysemys picta cpi-mir-216b precursor miRNA

Sequence

aagucauagacugggAAAUCUCUGCAGGCAAAUGUGauguauuuauagcaaucucacaauuaccuguagaguuucugcaaucug
......((((.(((((((.(((((((((.((.((((((((.......)))...))))).)).)))))))))))))).)).))))

Structure

aaguca    c  -     U         C  A     ---   au 
      uaga ug ggAAA CUCUGCAGG AA UGUGa   ugu  u
      |||| || ||||| ||||||||| || |||||   |||  u
      gucu ac ucuuu gagaugucc uu acacu   acg  a
------    a  g     -         a  a     cua   au 

Annotation confidence Not enough data

Genome context

KK083117.1: 219536-219619 [-]

Mature cpi-miR-216b-5p

• Accession: MIMAT0037844
• Description: Chrysemys picta cpi-miR-216b-5p mature miRNA
• Sequence: 16 - AAAUCUCUGCAGGCAAAUGUG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196