Stem-loop cpi-mir-217

Accession

MI0029541

Description

Chrysemys picta cpi-mir-217 precursor miRNA

Sequence

aguuuuugaugucgcagaUACUGCAUCAGGAACUGAUUGGauaauaaucagccaccaucaguuccuaaugcauugccuucagcaucuauacaagcauc
.((....(((((.(.((.((.(((((.(((((((((((((...........)))..)))))))))).))))).)).)).).)))))...)).......

Structure

------a  uuuu     c c  a  C     C          --   auaa 
       gu    gaugu g ag UA UGCAU AGGAACUGAU  UGG    u
       ||    ||||| | || || ||||| ||||||||||  |||    a
       ca    cuacg c uc gu acgua uccuugacua  acc    a
cuacgaa  -uau     a u  c  u     a          cc   gacu 

Annotation confidence Not enough data

Genome context

KK083117.1: 201885-201982 [-]

Mature cpi-miR-217-5p

• Accession: MIMAT0037845
• Description: Chrysemys picta cpi-miR-217-5p mature miRNA
• Sequence: 19 - UACUGCAUCAGGAACUGAUUGG - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196