Stem-loop cpi-mir-218-1

Accession

MI0029542

Description

Chrysemys picta cpi-mir-218-1 precursor miRNA

Sequence

agcgagauuuucugUUGUGCUUGAUCUAACCAUGUGguugcaagguaugaguaaaacaugguucugucaagcaccauggaacgucacgcagcu
.(((.(((.((((((.(((((((((..((((((((..((((.........)))).))))))))..))))))))).)))))).))).)))....

Structure

---a   a   u      U         CU        Gg    aag 
    gcg gau uucugU GUGCUUGAU  AACCAUGU  uugc   g
    ||| ||| |||||| |||||||||  ||||||||  ||||   u
    cgc cug aaggua cacgaacug  uugguaca  aaug   a
ucga   a   c      c         uc        -a    agu 

Annotation confidence Not enough data

Genome context

KK084027.1: 28867-28959 [+]

Mature cpi-miR-218-5p

• Accession: MIMAT0037846
• Description: Chrysemys picta cpi-miR-218-5p mature miRNA
• Sequence: 15 - UUGUGCUUGAUCUAACCAUGUG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196