miRBase entry: cpi-mir-363

Stem-loop cpi-mir-363

Accession

MI0029558

Description

Chrysemys picta cpi-mir-363 precursor miRNA

Sequence

uguuuugcuguugucggGUGGAUCACGAUGCAAUUUUGAuuaguuuagcaggagaaaAAUUGCACGGUAUCCAUCUGuaaaccgcaggacc
.(((((((.(((..(((((((((..((.(((((((((..((.((...))..))..)))))))))))..)))))))))..))).))))))).

Structure

u       u   gu         CA  A         GA  -a  u 
 guuuugc guu  cggGUGGAU  CG UGCAAUUUU  uu  gu  
 ||||||| |||  |||||||||  || |||||||||  ||  || u
 caggacg caa  GUCUACCUA  GC ACGUUAAaa  ag  cg  
c       c   au         UG  -         ag  ga  a

Annotation confidence Not enough data

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Genome context

KK088187.1: 4590949-4591039 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cpi-mir-363

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpi-miR-363-5p

Accession	MIMAT0037868
Description	Chrysemys picta cpi-miR-363-5p mature miRNA
Sequence	18 - GUGGAUCACGAUGCAAUUUUGA - 39
Evidence	experimental Illumina [1]

Mature cpi-miR-363-3p

Accession	MIMAT0037869
Description	Chrysemys picta cpi-miR-363-3p mature miRNA
Sequence	58 - AAUUGCACGGUAUCCAUCUG - 77
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196