miRBase entry: cpi-mir-375

Stem-loop cpi-mir-375


Accession
MI0029562
Description
Chrysemys picta cpi-mir-375 precursor miRNA


Sequence

agcaaccucugcacuugccuggcgucgagccccacgugcaagaccugacgugaacguUUUGUUCGUUCGGCUCGCGUUAggcagguccagccugucg
.(((....(((.((((((((((((.((((((..(((.(((((((...........))))))).)))..)))))))))))))))))).)))..)))..

Structure
-a   accu   c            u      cc   u       cuga 
  gca    cug acuugccuggcg cgagcc  acg gcaagac    c
  |||    ||| |||||||||||| ||||||  ||| |||||||    g
  ugu    gac uggacggAUUGC GCUCGG  UGC UGUUUug    u
gc   --cc   c            -      CU   U       caag 


Annotation confidence Not enough data
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Genome context
KK082919.1: 1101171-1101267 [+]

Database links

Mature cpi-miR-375-3p

Accession MIMAT0037873
Description Chrysemys picta cpi-miR-375-3p mature miRNA
Sequence 58 - UUUGUUCGUUCGGCUCGCGUUA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196