Stem-loop cpi-mir-383

Accession

MI0029563

Description

Chrysemys picta cpi-mir-383 precursor miRNA

Sequence

aagucaccugcuccucAGAUCAGAAGGUGAUUGUGGCUuugaguagauauuaagcagccacagcacugccuggucagaaagagcaaguguacu
.((((((.(((((.((.((((((..((((.((((((((((((.......))))..))))))))))))..)))))).))..))))).))).)))

Structure

a   -   c     -c  A      AA    A        --    gu 
 agu cac ugcuc  uc GAUCAG  GGUG UUGUGGCU  uuga  a
 ||| ||| |||||  || ||||||  |||| ||||||||  ||||  g
 uca gug acgag  ag cugguc  ucac gacaccga  aauu  a
-   u   a     aa  a      cg    -        cg    au 

Annotation confidence Not enough data

Genome context

KK082926.1: 8873731-8873823 [+]

Mature cpi-miR-383-5p

• Accession: MIMAT0037874
• Description: Chrysemys picta cpi-miR-383-5p mature miRNA
• Sequence: 17 - AGAUCAGAAGGUGAUUGUGGCU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196