Stem-loop cpi-mir-455

Accession

MI0029572

Description

Chrysemys picta cpi-mir-455 precursor miRNA

Sequence

ucccuggugugagggUAUGUGCCCUUGGACUACAUCGuggaagccagcaccAUGCAGUCCAUGGGCAUAUACacuugccucaagguuuau
.((.(((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).))).)).....

Structure

----u  c   u     g          U      A   C   gaa 
     cc ugg gugag gUAUGUGCCC UGGACU CAU Gug   g
     || ||| ||||| |||||||||| |||||| ||| |||    
     gg acu cguuc CAUAUACGGG ACCUGA GUA cac   c
uauuu  a   c     a          U      C   c   gac 

Annotation confidence Not enough data

Genome context

KK082974.1: 1002607-1002696 [-]

Mature cpi-miR-455-5p

• Accession: MIMAT0037887
• Description: Chrysemys picta cpi-miR-455-5p mature miRNA
• Sequence: 16 - UAUGUGCCCUUGGACUACAUCG - 37
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-455-3p

• Accession: MIMAT0037888
• Description: Chrysemys picta cpi-miR-455-3p mature miRNA
• Sequence: 52 - AUGCAGUCCAUGGGCAUAUAC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196