Stem-loop cpi-mir-1329

Accession

MI0029588

Description

Chrysemys picta cpi-mir-1329 precursor miRNA

Sequence

cagucugguuguagggaUACAGUGAUCAGGUUACGAGGgauuucucaaguaacaaccucguagcucggucacgauaucccuaugacuuagauaacaaca
..(((((((((((((((((..((((((.((((((((((.................)))))))))).))))))..)))))))))))).))))).......

Structure

-----ca     -            CA      A          gauuucu 
       gucug guuguagggaUA  GUGAUC GGUUACGAGG       c
       ||||| ||||||||||||  |||||| ||||||||||       a
       uagau caguaucccuau  cacugg ucgaugcucc       a
acaacaa     u            ag      c          aacaaug 

Annotation confidence Not enough data

Genome context

KK088203.1: 7545216-7545314 [-]

Mature cpi-miR-1329-5p

• Accession: MIMAT0037912
• Description: Chrysemys picta cpi-miR-1329-5p mature miRNA
• Sequence: 18 - UACAGUGAUCAGGUUACGAGG - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196