Stem-loop cpi-mir-1416

Accession

MI0029591

Description

Chrysemys picta cpi-mir-1416 precursor miRNA

Sequence

gauggaugacaccUCCUUAACUCAUGCCGCUGUGccuuucacccccacucccacaauuguaugaguugaguacagaguaucagacu
...(..(((.((((.((((((((((((...((((.................))))...))))))))))))...)).)).)))..).

Structure

gau ga   c  -  --C            CGC    ccuuuca 
   g  uga ac cU   CUUAACUCAUGC   UGUG       c
   |  ||| || ||   ||||||||||||   ||||       c
   c  acu ug ga   gaguugaguaug   acac       c
--u ag   a  a  cau            uua    ccucacc 

Annotation confidence Not enough data

Genome context

KK082927.1: 9195609-9195694 [-]

Mature cpi-miR-1416-5p

• Accession: MIMAT0037916
• Description: Chrysemys picta cpi-miR-1416-5p mature miRNA
• Sequence: 14 - UCCUUAACUCAUGCCGCUGUG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196