Stem-loop cpi-mir-1677g-1

Accession

MI0029600

Description

Chrysemys picta cpi-mir-1677g-1 precursor miRNA

Sequence

cacuuagucugaaggugaaauccuggcucuguugaugucuauagaaguuuuaccauUGACUUCAGUAGAAUCAGGAUUucucccucaugaguguu
((((((...(((.((.((((((((((.((((((((.(((..................))).)))))))).)))))))))).)).)))))))))..

Structure

--      guc   a  u          c        u   uauagaag 
  cacuua   uga gg gaaauccugg ucuguuga guc        u
  ||||||   ||| || |||||||||| |||||||| |||         
  gugagu   acu cc cuUUAGGACU AGAUGACU CAG        u
uu      ---   c  u          A        U   Uuaccauu 

Annotation confidence Not enough data

Genome context

KK082988.1: 2082489-2082583 [+]

Mature cpi-miR-1677g-3p

• Accession: MIMAT0037931
• Description: Chrysemys picta cpi-miR-1677g-3p mature miRNA
• Sequence: 57 - UGACUUCAGUAGAAUCAGGAUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196