Stem-loop cpi-mir-1677g-2

Accession

MI0029601

Description

Chrysemys picta cpi-mir-1677g-2 precursor miRNA

Sequence

guauagcuguugagcugaauccugguuccacugaaauaaugguaguuuugucguUGACUUCAGUAGAAUCAGGAUUuggcucauaauuagcugug
.((((((((.((((((((((((((((((.((((((.((((((........))))))..)))))).))))))))))))))))))....))))))))

Structure

g        ---u                  c      -a      uag 
 uauagcug    ugagcugaauccugguuc acugaa  uaaugg   u
 ||||||||    |||||||||||||||||| ||||||  ||||||    
 gugucgau    acucgguUUAGGACUAAG UGACUU  GUugcu   u
-        uaau                  A      CA      guu 

Annotation confidence Not enough data

Genome context

KK082951.1: 3331917-3332011 [+]

Mature cpi-miR-1677g-3p

• Accession: MIMAT0037931
• Description: Chrysemys picta cpi-miR-1677g-3p mature miRNA
• Sequence: 55 - UGACUUCAGUAGAAUCAGGAUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196