Stem-loop cpi-mir-1784

Accession

MI0029604

Description

Chrysemys picta cpi-mir-1784 precursor miRNA

Sequence

auuucuuagggcccaauucugcucucauucaaaucaaugagaguucuaccauUGACUUAACUGGGAGCACAAUUgggaccuaaga
...(((((((.(((((((.((((((((......((((((..........))))))......)))))))).))))))).)))))))

Structure

auu       g       c        uucaaa      agag 
   ucuuagg cccaauu ugcucuca      ucaaug    u
   ||||||| ||||||| ||||||||      ||||||     
   agaaucc gggUUAA ACGAGGGU      AGUuac    u
---       a       C        CAAUUC      cauc 

Annotation confidence Not enough data

Genome context

KK082962.1: 2911653-2911737 [-]

Mature cpi-miR-1784-3p

• Accession: MIMAT0037935
• Description: Chrysemys picta cpi-miR-1784-3p mature miRNA
• Sequence: 53 - UGACUUAACUGGGAGCACAAUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196