Stem-loop cpi-mir-9586

Accession

MI0029623

Description

Chrysemys picta cpi-mir-9586 precursor miRNA

Sequence

gagacuugggccUUGAUCCUGCCAUGAUCUCUGCAgaaacaaacccuugUGGAGCUCAUUGCAGGACUGGGaccuuaguuuu
((((((.((((((.(.((((((.((((.((((((((..........)))))))).)))).))))))).))).))).))))))

Structure

      u   -   U A      C    U        aaac 
gagacu ggg ccU G UCCUGC AUGA CUCUGCAg    a
|||||| ||| ||| | |||||| |||| ||||||||     
uuuuga ucc GGG C AGGACG UACU GAGGUguu    a
      u   a   U -      U    C        ccca 

Annotation confidence Not enough data

Genome context

KK082946.1: 610599-610680 [+]

Mature cpi-miR-9586-5p

• Accession: MIMAT0037968
• Description: Chrysemys picta cpi-miR-9586-5p mature miRNA
• Sequence: 13 - UUGAUCCUGCCAUGAUCUCUGCA - 35
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-9586-3p

• Accession: MIMAT0037969
• Description: Chrysemys picta cpi-miR-9586-3p mature miRNA
• Sequence: 50 - UGGAGCUCAUUGCAGGACUGGG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196