Stem-loop cpi-mir-727

Accession

MI0029638

Description

Chrysemys picta cpi-mir-727 precursor miRNA

Sequence

uugcccuguaugucauuuucagucuucaauuccucccagcccauuaaauggaaacugagUUGAGGCGAGUUGAAGACUAAAaaugcugugcagaauca
.....(((((((.((((((.((((((((((((..((((((((((...)))).......)))).)).)))))))))))).)))))).))))))).....

Structure

uugcc       u      c            cu  -    -------    u 
     cuguaug cauuuu agucuucaauuc  cc cagc       ccau  
     ||||||| |||||| ||||||||||||  || ||||       |||| a
     gacgugu guaaAA UCAGAAGUUGAG  GG GUUg       ggua  
acuaa       c      A            -C  A    agucaaa    a 

Annotation confidence Not enough data

Genome context

KK088247.1: 4735799-4735896 [-]

Mature cpi-miR-727-3p

• Accession: MIMAT0037998
• Description: Chrysemys picta cpi-miR-727-3p mature miRNA
• Sequence: 60 - UUGAGGCGAGUUGAAGACUAAA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196