Stem-loop ami-mir-10a

Accession

MI0029663

Description

Alligator mississippiensis ami-mir-10a precursor miRNA

Sequence

gucuucuauaugUACCCUGUAGAUCCGAAUUUGUGuaaaggaaguugcgucACAAAUUCGUAUCUAGGGGAAUauguaguugacacaa
(((..((((((((.((((.(((((.((((((((((...............)))))))))).))))))))).))))))))..)))....

Structure

----   uu        A    G     C          uaaagg 
    guc  cuauaugU CCCU UAGAU CGAAUUUGUG      a
    |||  |||||||| |||| ||||| ||||||||||      a
    cag  gauguaUA GGGG AUCUA GCUUAAACAc      g
aaca   uu        A    -     U          ugcguu 

Annotation confidence Not enough data

Genome context

AKHW03000817.1: 3410183-3410270 [-]

Mature ami-miR-10a-5p

• Accession: MIMAT0038030
• Description: Alligator mississippiensis ami-miR-10a-5p mature miRNA
• Sequence: 13 - UACCCUGUAGAUCCGAAUUUGUG - 35
• Evidence: experimental ; Illumina [1]

Mature ami-miR-10a-3p

• Accession: MIMAT0038031
• Description: Alligator mississippiensis ami-miR-10a-3p mature miRNA
• Sequence: 52 - ACAAAUUCGUAUCUAGGGGAAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196